bionty.Protein¶
- class bionty.Protein(name: str | None, uniprotkb_id: str | None, synonyms: str | None, length: int | None, gene_symbol: str | None, ensembl_gene_ids: str | None, organism: Organism | None, source: Source | None)¶
Bases:
BioRecord,TracksRun,TracksUpdatesProteins - Uniprot.
Notes
For more info, see tutorials Manage biological registries and Protein.
Bulk create Protein records via
from_values().Examples
>>> record = bionty.Protein.from_source(name="Synaptotagmin-15B", organism="human") >>> record = bionty.Protein.from_source(gene_symbol="SYT15B", organism="human")
Simple fields¶
- uid: str¶
A universal id (hash of selected field).
- name: str | None¶
Unique name of a protein.
- uniprotkb_id: str | None¶
UniProt protein ID, 6 alphanumeric characters, possibly suffixed by 4 more.
- synonyms: str | None¶
Bar-separated (|) synonyms that correspond to this protein.
- description: str | None¶
Description of the protein.
- length: int | None¶
Length of the protein sequence.
- gene_symbol: str | None¶
The primary gene symbol corresponds to this protein.
- ensembl_gene_ids: str | None¶
Bar-separated (|) Ensembl Gene IDs that correspond to this protein.
- created_at: datetime¶
Time of creation of record.
- updated_at: datetime¶
Time of last update to record.
Methods¶